CFAR-Supported Papers


How do I get my papers on the list?

If your research was supported through CFAR cores or grant funding, please include our grant number (P30 AI036214) in the funding or acknowledgements section of your papers. Follow these instructions and examples.

We'll add your papers to the list below when you notify us that they are in press or when we receive notice from the NIH. Who knows? One of your papers may be selected as the Directors' Choice on the CFAR home page.

Papers Supported by the San Diego CFAR



Caskey M, Schoofs T, Gruell H, Settler A, Karagounis T, Kreider EF, Murrell B, Pfeifer N, Nogueira L, Oliveira TY, Learn GH, Cohen YZ, Lehmann C, Gillor D, Shimeliovich I, Unson-O'Brien C, Weiland D, Robles A, Kummerle T, Wyen C, Levin R, Witmer-Pack M, Eren K, Ignacio C, Kiss S, West AP, Jr., Mouquet H, Zingman BS, Gulick RM, Keler T, Bjorkman PJ, Seaman MS, Hahn BH, Fatkenheuer G, Schlesinger SJ, Nussenzweig MC, Klein F. Antibody 10-1074 suppresses viremia in HIV-1-infected individualsNat Med. 2017;23(2):185-191. PMID: 28092665. PMCID: 5467219.

Chaillon A, Smith DM, Vanpouille C, Lisco A, Jordan P, Caballero G, Vargas M, Gianella S, Mehta SR. HIV trafficking between blood and semen during early untreated HIV infectionJ Acquir Immune Defic Syndr. 2017;74(1):95-102. PMCID: 5140710

Drozd DR, Saag MS, Westfall AO, Mathews WC, Haubrich R, Boswell SL, Cole SR, Porter D, Kitahata MM, Juday T, Rosenblatt L, CFAR Network of Integrated Clinical Systems. Comparative effectiveness of single versus multiple tablet antiretroviral therapy regimens in clinical HIV practiceMedicine (Baltimore). 2017;96(14):e6275. PMID: 28383402. PMCID: 5411186.

Fatukasi TV, Cole SR, Moore RD, Mathews WC, Edwards JK, Eron JJ, and the CNICS investigators. Risk factors for delayed antiretroviral therapy initiation among HIV-seropositive patientsPLoS One. 2017;12(7):e0180843. PMID: 28700693. PMCID: 5507276.

Gianella S, Taylor J, Brown TR, Kaytes A, Achim CL, Moore DJ, Little SJ, Ellis RJ, Smith DM. Can research at the end of life be a useful tool to advance HIV cure? AIDS. 2017;31(1):1-4. PMCID: 5137789

Graves SK, Little SJ, Hoenigl M. Risk profile and HIV testing outcomes of women undergoing community-based testing in San Diego 2008-2014Sci Rep. 2017;7:42183. PMID: 28165056. PMCID: 5292713.

Green N, Hoenigl M, Chaillon A, Anderson CM, Kosakovsky Pond SL, Smith DM, Little SJ. Partner services in adults with acute and early HIV infectionAIDS. 2017;31(2):287-293. PMCID: 5177524

Hickman M, Martin NK, Huxtable R. Hepatitis C virus prevention and treatment prioritization-ethical, economic and evidential dimensions of early rather than delayed treatment for people who inject drugsAddiction. 2017;112(2):201-203. PMCID: 5233591

Hoenigl M, Braun DL, Kouyos R, Gunthard HF, Little SJ. Evaluation of the predictive potential of the short acute retroviral syndrome severity score for HIV-1 disease progression in individuals with acute HIV infection. J Acquir Immune Defic Syndr. 2017;74(4):e114-e117. PMID: 28225720. PMCID: 5324781.

Director's Choice!  Innes S, van Toorn R, Otwombe K, Dobbels E, van Zyl G, Cotton MF, Laughton B. Late onset HIV encephalopathy in children with long-standing virologic suppression followed by slow spontaneous recovery despite no change in antiretroviral therapy - four case reportsPediatr Infect Dis J. 2017:[Epub ahead of print]  doi: 10.1097/INF.0000000000001694. PMID: 28719495. 

Oliveira MF, Chaillon A, Nakazawa M, Vargas M, Letendre SL, Strain MC, Ellis RJ, Morris S, Little SJ, Smith DM, Gianella S. Early antiretroviral therapy is associated with lower HIV DNA molecular diversity and lower inflammation in cerebrospinal fluid but does not prevent the establishment of compartmentalized HIV DNA populationsPLoS Pathog. 2017;13(1):e1006112. PMCID: 5266327

Osorio G, Hoenigl M, Quartarolo J, Barger K, Morris SR, Reed SL, Lee J, Little SJ. Evaluation of opt-out inpatient HIV screening at an urban teaching hospitalAIDS Care. 2017:1-5. PMID: 28114789. PMCID: 5469710.

Spies G, Fennema-Notestine C, Cherner M, Seedat S. Changes in cognitive function in women with HIV infection and early life stressAIDS Care. 2017;29(1):14-23. PMID: 27396980. PMCID: 5157837.

Vitomirov A, Ramirez-Gaona M, Mehta SR, Perez-Santiago J. Random shearing as an alternative to digestion for mitochondrial DNA processing in droplet digital PCRMitochondrion. 2017;32:16-18. PMID: 27838478. PMCID: 5218872.

Wertheim JO, Kosakovsky Pond SL, Forgione LA, Mehta SR, Murrell B, Shah S, Smith DM, Scheffler K, Torian LV. Social and genetic networks of HIV-1 transmission in New York CityPLoS Pathog. 2017;13(1):e1006000. PMCID: 5221827.


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